Disease: Neoplasm Metastasis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs2555639 0.851 0.080 4 174540379 non coding transcript exon variant T/C snv 0.38 7
rs60745952
LOC107986195 ; LOC105377481
0.925 0.080 4 148827842 intron variant T/C snv 0.13 6
rs752021744
PIK3CB
0.689 0.440 3 138759306 missense variant T/C snv 1.2E-05 29
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs7758229
SLC22A3
0.732 0.120 6 160419220 intron variant G/A;T snv 16
rs28929495
EGFR
0.807 0.120 7 55174014 missense variant G/A;C;T snv 9
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs1801157
CXCL12
0.611 0.600 10 44372809 3 prime UTR variant C/T snv 0.16 46
rs77191406
TNFAIP3
0.790 0.280 6 137881704 3 prime UTR variant C/T snv 7.2E-04 12
rs1179251
IL22 ; LOC105369818
0.763 0.320 12 68251271 intron variant C/G snv 0.18 14
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs3775292
TLR3
0.851 0.080 4 186081871 non coding transcript exon variant C/G snv 0.82 5
rs35301225
MIR34A ; MIR34AHG
0.882 0.080 1 9151743 mature miRNA variant C/A;T snv 5
rs112445441
KRAS
0.658 0.400 12 25245347 missense variant C/A;G;T snv 32
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs121913227
BRAF
0.653 0.320 7 140753336 missense variant AC/CT;TT mnv 31
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223